I have not played Breath of the Wild. I do not own the system for it. It looks good though.
That said - my list:
1st - Ocarina of Time
2nd - A link to the Past
3rd - Twilight Princess
I ranked these in the amounts of fun I had with the game when it was current. I mean I grew up with The Legend of Zelda on the NES and The Adventures of Link, but those did not compare in fun of the ones I wrote down.
Skyward Sword I have too. But while I did have a bit of fun, I do not even consider it a Zelda game. It is so linear. Visiting the same area time and again. Having an invincibility potion?? Skyward Sword is for me by far the worst and easiest of all the Zelda's I have ever played. And I was so excited for it when I got it first.