Its pretty simple, Blizzard has likely already thought of it. How about once you are logged in while using an authenticator it locks your account login so you cannot be disconnected by someone else trying to connect to your account, and the same thing for the battle.net account. Basically have a message pop up saying the account is in use and locked for the time being. I am pretty sure they can do this easily. That way it cock blocks assholes trying to intercept your one time password to login.